ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5FIX6_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5FIX6_nD1

A5FIX6_nD1

UID: 004115173

AlphaFold

Range: 1-110,211-300
AlphaFold: AF-A5FIX6
UniProt: A5FIX6 (all domains)
Gene: rsmH

Protein: Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)

3D Structure

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Related Domains

Browse other domains in Methyltransf_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_5(2003.1.5.17)

Pfam Families

PF01795Methyltransf_5

MraW methylase family

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: A5FIX6 UniProt: A5FIX6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-110,211-300