ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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E3PRJ4_nD1 - ECOD Domain | ECOD

ECOD/Domains/E3PRJ4_nD1

E3PRJ4_nD1

UID: 004116711

AlphaFold

Range: 21-95
AlphaFold: AF-E3PRJ4
UniProt: E3PRJ4 (all domains)
Gene: kamE

Protein: Lysine 5,6-aminomutase beta subunit (5,6-LAM) (EC 5.4.3.3) (D-lysine 5,6-aminomutase beta subunit) (L-beta-lysine 5,6-aminomutase beta subunit)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupDodecin subunit-like(872)

HH-groupD-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain(872.5)

TT-groupD-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain(872.5.1)

FFamilyOAM_dimer(872.5.1.1)

Pfam Families

PF16554OAM_dimer

Dimerisation domain of d-ornithine 4,5-aminomutase

External Links

AlphaFold DB: E3PRJ4 UniProt: E3PRJ4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-95