ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q88NU6_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q88NU6_nD1

Q88NU6_nD1

UID: 004120733

AlphaFold

Range: 36-255,261-400,406-800
AlphaFold: AF-Q88NU6
UniProt: Q88NU6 (all domains)

3D Structure

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Related Domains

Browse other domains in Penicil_amidase →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupPenicillin acylase, catalytic domain(210.1.2)

FFamilyPenicil_amidase(210.1.2.1)

Pfam Families

PF01804Penicil_amidase

Penicillin amidase

ClanCL0052NTN

External Links

AlphaFold DB: Q88NU6 UniProt: Q88NU6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-255,261-400,406-800