ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5JGD9_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JGD9_nD1

Q5JGD9_nD1

UID: 004122782

AlphaFold

Range: 6-120
AlphaFold: AF-Q5JGD9
UniProt: Q5JGD9 (all domains)
Gene: hjc

Protein: Crossover junction endodeoxyribonuclease Hjc (Hjc) (EC 3.1.21.10) (Holliday junction resolvase Hjc)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Hjc →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyHjc(2008.1.1.3)

Pfam Families

Archaeal holliday junction resolvase (hjc)

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q5JGD9 UniProt: Q5JGD9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-120