ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P0CX58_nD2 - ECOD Domain | ECOD

ECOD/Domains/P0CX58_nD2

P0CX58_nD2

UID: 004124156

AlphaFold

Range: 266-360
UniProt: P0CX58 (all domains)
Gene: TY1A-PR1

Protein: Transposon Ty1-PR1 Gag polyprotein (Gag-p49) (Transposon Ty1 protein A) (TY1A) (TYA) (p58) [Cleaved into: Capsid protein (CA) (Gag-p45) (p54); Gag-p4]

3D Structure

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Related Domains

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Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyTYA(170.1.1.17)

Pfam Families

Ty transposon capsid protein

ClanCL0523GAG-polyprotein

External Links

UniProt: P0CX58

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