ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A3PDP9_nD1 - ECOD Domain | ECOD

ECOD/Domains/A3PDP9_nD1

A3PDP9_nD1

UID: 004124189

AlphaFold

Range: 31-120,226-290
AlphaFold: AF-A3PDP9
UniProt: A3PDP9 (all domains)
Gene: phnD2

Protein: Probable ABC transporter phosphonate/phosphite binding protein PhnD2

3D Structure

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Related Domains

Browse other domains in Phosphonate-bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyPhosphonate-bd(7523.1.1.25)

Pfam Families

PF12974Phosphonate-bd

ABC transporter, phosphonate, periplasmic substrate-binding protein

ClanCL0177PBP

External Links

AlphaFold DB: A3PDP9 UniProt: A3PDP9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-120,226-290