ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q899Y1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q899Y1_nD2

Q899Y1_nD2

UID: 004125302

AlphaFold

Range: 341-615
AlphaFold: AF-Q899Y1
UniProt: Q899Y1 (all domains)
Gene: colT

Protein: Collagenase ColT (EC 3.4.24.3) (Microbial collagenase)

3D Structure

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Related Domains

Browse other domains in Peptidase_M9 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M9(2498.1.1.16)

Pfam Families

PF01752Peptidase_M9

Collagenase

ClanCL0126Peptidase_MA

External Links

AlphaFold DB: Q899Y1 UniProt: Q899Y1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 341-615