ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A5IKK4_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5IKK4_nD1

A5IKK4_nD1

UID: 004126752

AlphaFold

Range: 1-220
AlphaFold: AF-A5IKK4
UniProt: A5IKK4 (all domains)

3D Structure

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Related Domains

Browse other domains in tRNA_synt_2f →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20)

TT-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20.1)

FFamilytRNA_synt_2f(304.20.1.5)

Pfam Families

PF02092tRNA_synt_2f

Glycyl-tRNA synthetase beta subunit

External Links

AlphaFold DB: A5IKK4 UniProt: A5IKK4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-220