ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q2A5E5_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q2A5E5_nD2

Q2A5E5_nD2

UID: 004127585

AlphaFold

Range: 11-55,176-235
AlphaFold: AF-Q2A5E5
UniProt: Q2A5E5 (all domains)
Gene: rpoA1

Protein: DNA-directed RNA polymerase subunit alpha 1 (RNAP subunit alpha 1) (EC 2.7.7.6) (RNA polymerase subunit alpha 1) (Transcriptase subunit alpha 1)

3D Structure

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Related Domains

Browse other domains in RNA_pol_L →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDCoH-like(305)

HH-groupRBP11-like subunits of RNA polymerase(305.1)

TT-groupRBP11-like subunits of RNA polymerase(305.1.1)

FFamilyRNA_pol_L(305.1.1.1)

Pfam Families

PF01193RNA_pol_L

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

AlphaFold DB: Q2A5E5 UniProt: Q2A5E5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-55,176-235