ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5F4E5_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5F4E5_nD1

A5F4E5_nD1

UID: 004129237

AlphaFold

Range: 16-260
AlphaFold: AF-A5F4E5
UniProt: A5F4E5 (all domains)
Gene: ubiE

Protein: Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase)

3D Structure

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Related Domains

Browse other domains in Ubie_methyltran →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyUbie_methyltran(2003.1.5.8)

Pfam Families

PF01209Ubie_methyltran

ubiE/COQ5 methyltransferase family

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: A5F4E5 UniProt: A5F4E5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-260