ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q46731_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q46731_nD1

Q46731_nD1

UID: 004129938

AlphaFold

Range: 6-475
AlphaFold: AF-Q46731
UniProt: Q46731 (all domains)
Gene: tnpA

Protein: Transposase for transposon Tn5 (EC 3.1.-.-) (Tnp)

3D Structure

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Related Domains

Browse other domains in DDE_Tnp_1,Tnp_DNA_bind →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDDE_Tnp_1,Tnp_DNA_bind(2484.1.1.19)

Pfam Families

PF01609DDE_Tnp_1

Transposase DDE domain

ClanCL0219RNase_H

PF14706Tnp_DNA_bind

Transposase DNA-binding

External Links

AlphaFold DB: Q46731 UniProt: Q46731

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-475