ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9KN42_nD6 - ECOD Domain | ECOD

ECOD/Domains/Q9KN42_nD6

Q9KN42_nD6

UID: 004137082

AlphaFold

Range: 461-625
AlphaFold: AF-Q9KN42
UniProt: Q9KN42 (all domains)
Gene: vgrG3

Protein: Type VI secretion system spike protein VgrG3 (Muramidase Vgrg3C) (EC 3.2.1.-)

3D Structure

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Related Domains

Browse other domains in Gp5_trimer_C →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupPhage tail fiber protein trimerization domain(79)

HH-groupPhage tail fiber protein trimerization domain(79.1)

TT-groupPhage tail fiber protein trimerization domain(79.1.1)

FFamilyGp5_trimer_C(79.1.1.13)

Pfam Families

PF22178Gp5_trimer_C

Bacteriophage T4 gp5 C-terminal trimerisation domain

ClanCL0606Phage_fibre

External Links

AlphaFold DB: Q9KN42 UniProt: Q9KN42

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 461-625