ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O65039_nD2 - ECOD Domain | ECOD

ECOD/Domains/O65039_nD2

O65039_nD2

UID: 004139923

AlphaFold

Range: 101-345
AlphaFold: AF-O65039
UniProt: O65039 (all domains)
Gene: CYSEP

Protein: Vignain (EC 3.4.22.-) (Cysteine endopeptidase)

3D Structure

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Related Domains

Browse other domains in Peptidase_C1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C1(219.1.1.1)

Pfam Families

PF00112Peptidase_C1

Papain family cysteine protease

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: O65039 UniProt: O65039

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-345