ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ao4B1 - ECOD Domain | ECOD

ECOD/Domains/e3ao4B1

e3ao4B1

UID: 000414134

PDB

Range: B:57-207
PDB: 3AO4 chain B(all domains)
UniProt: Q72498 (all domains)
Gene: pol

Molecule: POL polyprotein

3D Structure

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Related Domains

Browse other domains in rve →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve(2484.1.1.9)

Ligands

in contact, ≤ 4 Å

3-(1,3-benzodioxol-5-yl)-1-methyl-1H-pyrazol-5-amine833
Cadmium ionCD
metal
Chloride ionCL

Pfam Families

Integrase core domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 3AO4 RCSB PDB: 3AO4 PDBe: 3AO4 UniProt: Q72498

Downloads

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+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.