ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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E6LHV2_nD3 - ECOD Domain | ECOD

ECOD/Domains/E6LHV2_nD3

E6LHV2_nD3

UID: 004150216

AlphaFold

Range: 241-410
AlphaFold: AF-E6LHV2
UniProt: E6LHV2 (all domains)
Gene: csm6

Protein: CRISPR system endoribonuclease Csm6 (EC 3.1.-.-) (CRISPR type III-A associated protein Csm6)

3D Structure

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Related Domains

Browse other domains in Cas_Csm6_HEPN →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupHEPN(601.7)

TT-groupNucleotidyltransferase substrate binding subunit/domain(601.7.1)

FFamilyCas_Csm6_HEPN(601.7.1.8)

Pfam Families

PF09659Cas_Csm6_HEPN

Cas_Csm6 HEPN domain

ClanCL0291KNTase_C

External Links

AlphaFold DB: E6LHV2 UniProt: E6LHV2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 241-410