ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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P48988_nD1 - ECOD Domain | ECOD

ECOD/Domains/P48988_nD1

P48988_nD1

UID: 004154034

AlphaFold

Range: 6-65
AlphaFold: AF-P48988
UniProt: P48988 (all domains)

3D Structure

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Related Domains

Browse other domains in CENP-B_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyCENP-B_N(101.1.1.24)

Pfam Families

PF04218CENP-B_N

CENP-B N-terminal DNA-binding domain

ClanCL0123HTH

External Links

AlphaFold DB: P48988 UniProt: P48988

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-65