ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C5A074_nD2 - ECOD Domain | ECOD

ECOD/Domains/C5A074_nD2

C5A074_nD2

UID: 004155898

AlphaFold

Range: 176-220
AlphaFold: AF-C5A074
UniProt: C5A074 (all domains)
Gene: rhaR

Protein: HTH-type transcriptional activator RhaR (L-rhamnose operon transcriptional activator RhaR)

3D Structure

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Related Domains

Browse other domains in HTH_AraC →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyHTH_AraC(101.1.1.2)

Pfam Families

PF00165HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

ClanCL0123HTH

External Links

AlphaFold DB: C5A074 UniProt: C5A074

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-220