ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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P54123_nD2 - ECOD Domain | ECOD

ECOD/Domains/P54123_nD2

P54123_nD2

UID: 004160420

AlphaFold

Range: 211-370
AlphaFold: AF-P54123
UniProt: P54123 (all domains)

3D Structure

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Related Domains

Browse other domains in RNase_J_b_CASP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRNase_J_b_CASP(2004.1.1.231)

Pfam Families

PF22505RNase_J_b_CASP

Ribonuclease J, beta-CASP domain

External Links

AlphaFold DB: P54123 UniProt: P54123

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 211-370