ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q4L6F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q4L6F1_nD1

Q4L6F1_nD1

UID: 004160648

AlphaFold

Range: 1-185
AlphaFold: AF-Q4L6F1
UniProt: Q4L6F1 (all domains)
Gene: SH1465

Protein: UPF0398 protein SH1465

3D Structure

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Related Domains

Browse other domains in YpsA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMCP/YpsA-related(7563)

HH-groupMCP/YpsA-related(7563.1)

TT-groupMCP/YpsA-related(7563.1.1)

FFamilyYpsA(7563.1.1.4)

Pfam Families

YspA SLOG family

ClanCL0349SLOG

External Links

AlphaFold DB: Q4L6F1 UniProt: Q4L6F1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-185