ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9U6Y4_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9U6Y4_nD1

Q9U6Y4_nD1

UID: 004160832

AlphaFold

Range: 1-230
AlphaFold: AF-Q9U6Y4
UniProt: Q9U6Y4 (all domains)

Protein: GFP-like fluorescent chromoprotein FP538 (zFP538) [Cleaved into: GFP-like fluorescent chromoprotein FP538 chain 1; GFP-like fluorescent chromoprotein FP538 chain 2]

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

AlphaFold DB: Q9U6Y4 UniProt: Q9U6Y4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-230