ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5L3Y1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5L3Y1_nD1

Q5L3Y1_nD1

UID: 004161603

AlphaFold

Range: 1-190
AlphaFold: AF-Q5L3Y1
UniProt: Q5L3Y1 (all domains)
Gene: pdxT

Protein: Pyridoxal 5'-phosphate synthase subunit PdxT (EC 4.3.3.6) (Pdx2) (Pyridoxal 5'-phosphate synthase glutaminase subunit) (EC 3.5.1.2)

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilySNO(2007.1.1.2)

Pfam Families

SNO glutamine amidotransferase family

ClanCL0014Glutaminase_I

External Links

AlphaFold DB: Q5L3Y1 UniProt: Q5L3Y1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-190