ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xzpA1 - ECOD Domain | ECOD

ECOD/Domains/e2xzpA1

e2xzpA1

UID: 000416419

PDB

Range: A:0-322,A:415-699
PDB: 2XZP chain A(all domains)
UniProt: Q92900 (all domains)
Gene: UPF1

Molecule: REGULATOR OF NONSENSE TRANSCRIPTS 1

3D Structure

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Related Domains

Browse other domains in AAA_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_11(2004.1.1.184)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Malonate Ion)

GlycerinGOL
DrugBank DB09462
Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2XZP RCSB PDB: 2XZP PDBe: 2XZP UniProt: Q92900

Downloads

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