ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1qhdA2 - ECOD Domain | ECOD

ECOD/Domains/e1qhdA2

e1qhdA2

UID: 000004170

RepresentativePDB

Range: A:1-148,A:333-397
PDB: 1QHD chain A(all domains)
UniProt: P04509 (all domains)

Molecule: Intermediate capsid protein VP6

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rota_Capsid_VP6 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupA virus capsid protein alpha-helical domain(617)

HH-groupA virus capsid protein alpha-helical domain(617.1)

TT-groupA virus capsid protein alpha-helical domain(617.1.1)

FFamilyRota_Capsid_VP6(617.1.1.2)

Pfam Families

PF00980Rota_Capsid_VP6

Rotavirus major capsid protein VP6

External Links

ECOD PDB View: 1QHD RCSB PDB: 1QHD PDBe: 1QHD UniProt: P04509

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure