ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8FHV4_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8FHV4_nD1

Q8FHV4_nD1

UID: 004170422

AlphaFold

Range: 1-60
AlphaFold: AF-Q8FHV4
UniProt: Q8FHV4 (all domains)
Gene: rluB

Protein: Ribosomal large subunit pseudouridine synthase B (EC 5.4.99.22) (23S rRNA pseudouridine(2605) synthase) (rRNA pseudouridylate synthase B) (rRNA-uridine isomerase B)

3D Structure

Loading viewer...

Related Domains

Browse other domains in S4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyS4(221.1.2.5)

Pfam Families

S4 domain

ClanCL0492S4

External Links

AlphaFold DB: Q8FHV4 UniProt: Q8FHV4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-60