ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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P28615_nD3 - ECOD Domain | ECOD

ECOD/Domains/P28615_nD3

P28615_nD3

UID: 004170747

AlphaFold

Range: 286-420
AlphaFold: AF-P28615
UniProt: P28615 (all domains)

3D Structure

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Related Domains

Browse other domains in Sigma-54, DNA binding domain / Sigma-54 factor, core binding domain →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySigma-54, DNA binding domain / Sigma-54 factor, core binding domain(101.1.1.33)

Pfam Families

PF04552Sigma54_DBD

Sigma-54, DNA binding domain

ClanCL0123HTH

PF04963Sigma54_CBD

Sigma-54 factor, core binding domain

ClanCL0123HTH

External Links

AlphaFold DB: P28615 UniProt: P28615

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-420