ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5SHB1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5SHB1_nD1

Q5SHB1_nD1

UID: 004174705

AlphaFold

Range: 1-180
AlphaFold: AF-Q5SHB1
UniProt: Q5SHB1 (all domains)
Gene: TTHA1819

Protein: RNA 2',3'-cyclic phosphodiesterase (RNA 2',3'-CPDase) (EC 3.1.4.58)

3D Structure

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Related Domains

Browse other domains in LigT_PEase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamilyLigT_PEase(264.1.1.1)

Pfam Families

PF02834LigT_PEase

LigT like Phosphoesterase

ClanCL02472H

External Links

AlphaFold DB: Q5SHB1 UniProt: Q5SHB1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-180