ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5FQM6_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5FQM6_nD1

Q5FQM6_nD1

UID: 004177588

AlphaFold

Range: 16-95
AlphaFold: AF-Q5FQM6
UniProt: Q5FQM6 (all domains)
Gene: rimP

Protein: Ribosome maturation factor RimP

3D Structure

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Related Domains

Browse other domains in RimP_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupYhbC-like, N-terminal domain(327.4)

TT-groupYhbC-like, N-terminal domain(327.4.1)

FFamilyRimP_N(327.4.1.1)

Pfam Families

RimP N-terminal domain

External Links

AlphaFold DB: Q5FQM6 UniProt: Q5FQM6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-95