ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q88U41_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q88U41_nD5

Q88U41_nD5

UID: 004181314

AlphaFold

Range: 986-1043,1076-1249
AlphaFold: AF-Q88U41
UniProt: Q88U41 (all domains)

3D Structure

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Related Domains

Browse other domains in PDDEXK_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyPDDEXK_1(2008.1.1.59)

Pfam Families

PF12705PDDEXK_1

PD-(D/E)XK nuclease superfamily

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q88U41 UniProt: Q88U41

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 986-1043,1076-1249