ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JIB3_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JIB3_nD1

Q5JIB3_nD1

UID: 004183368

AlphaFold

Range: 6-320
AlphaFold: AF-Q5JIB3
UniProt: Q5JIB3 (all domains)
Gene: trm1

Protein: tRNA (guanine(26)-N(2))-dimethyltransferase (EC 2.1.1.216) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase)

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyTRM(2003.1.5.19)

Pfam Families

N2,N2-dimethylguanosine tRNA methyltransferase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q5JIB3 UniProt: Q5JIB3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-320