ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A7ZYF5_nD2 - ECOD Domain | ECOD

ECOD/Domains/A7ZYF5_nD2

A7ZYF5_nD2

UID: 004184119

AlphaFold

Range: 96-295
AlphaFold: AF-A7ZYF5
UniProt: A7ZYF5 (all domains)
Gene: rimK

Protein: Ribosomal protein bS6--L-glutamate ligase (EC 6.3.2.-) (Poly-alpha-glutamate synthase) (Ribosomal protein bS6 modification protein)

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyRimK(206.1.3.21)

Pfam Families

RimK-like ATP-grasp domain

ClanCL0179ATP-grasp

External Links

AlphaFold DB: A7ZYF5 UniProt: A7ZYF5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-295