ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B7IA15_nD1 - ECOD Domain | ECOD

ECOD/Domains/B7IA15_nD1

B7IA15_nD1

UID: 004188795

AlphaFold

Range: 1-208
AlphaFold: AF-B7IA15
UniProt: B7IA15 (all domains)
Gene: rpsD

Protein: Small ribosomal subunit protein uS4 (30S ribosomal protein S4)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S4,S4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRibosomal_S4,S4(221.1.2.1)

Pfam Families

PF00163Ribosomal_S4

Ribosomal protein S4/S9 N-terminal domain

ClanCL0492S4

S4 domain

ClanCL0492S4

External Links

AlphaFold DB: B7IA15 UniProt: B7IA15

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-208