ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5SPW0_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5SPW0_nD2

Q5SPW0_nD2

UID: 004194934

RepresentativeAlphaFold

Range: 231-490,586-975
AlphaFold: AF-Q5SPW0
UniProt: Q5SPW0 (all domains)
Gene: Vps54

Protein: Vacuolar protein sorting-associated protein 54 (Tumor antigen SLP-8p homolog)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Vps54 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps54(109.4.1.514)

Pfam Families

Vps54-like protein

External Links

AlphaFold DB: Q5SPW0 UniProt: Q5SPW0

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 231-490,586-975