ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A8AFL6_nD3 - ECOD Domain | ECOD

ECOD/Domains/A8AFL6_nD3

A8AFL6_nD3

UID: 004195021

AlphaFold

Range: 411-470
AlphaFold: AF-A8AFL6
UniProt: A8AFL6 (all domains)
Gene: rsmF

Protein: Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.178) (16S rRNA m5C1407 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmF)

3D Structure

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Related Domains

Browse other domains in Methyltranf_PUA →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyMethyltranf_PUA(1.1.9.15)

Pfam Families

PF13636Methyltranf_PUA

Methyltransferase RsmF PUA domain

ClanCL0178PUA

External Links

AlphaFold DB: A8AFL6 UniProt: A8AFL6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 411-470