ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5XAQ7_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5XAQ7_nD1

Q5XAQ7_nD1

UID: 004207281

AlphaFold

Range: 1-100
AlphaFold: AF-Q5XAQ7
UniProt: Q5XAQ7 (all domains)
Gene: hpf

Protein: Ribosome hibernation promotion factor (HPF) (Ribosome-associated factor Y)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S30AE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupRibosome binding protein Y (YfiA homologue)(330.2)

TT-groupRibosome binding protein Y (YfiA homologue)(330.2.1)

FFamilyRibosomal_S30AE(330.2.1.1)

Pfam Families

PF02482Ribosomal_S30AE

Sigma 54 modulation protein / S30EA ribosomal protein

ClanCL0219RNase_H

External Links

AlphaFold DB: Q5XAQ7 UniProt: Q5XAQ7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-100