ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3rmyC1 - ECOD Domain | ECOD

ECOD/Domains/e3rmyC1

e3rmyC1

UID: 000421031

PDB

Range: C:862-1079
PDB: 3RMY chain C(all domains)
UniProt: P19321 (all domains)
Gene: botD

Molecule: Botulinum neurotoxin type D (BoNT/D) (Bontoxilysin-D) [Cleaved into: Botulinum neurotoxin D light chain (LC) (EC 3.4.24.69); Botulinum neurotoxin D heavy chain (HC)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Toxin_R_bind_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyToxin_R_bind_N(10.1.1.25)

Pfam Families

PF07953Toxin_R_bind_N

Clostridium neurotoxin, N-terminal receptor binding

ClanCL0004Concanavalin

External Links

ECOD PDB View: 3RMY RCSB PDB: 3RMY PDBe: 3RMY UniProt: P19321

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure