ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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P0AGJ4_nD1 - ECOD Domain | ECOD

ECOD/Domains/P0AGJ4_nD1

P0AGJ4_nD1

UID: 004212821

AlphaFold

Range: 1-225
UniProt: P0AGJ4 (all domains)

3D Structure

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Related Domains

Browse other domains in SpoU_methylase,SpoU_methylas_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySpoU_methylase,SpoU_methylas_C(2488.1.1.2)

Pfam Families

PF00588SpoU_methylase

SpoU rRNA Methylase family

ClanCL0098SPOUT

PF12105SpoU_methylas_C

SpoU, rRNA methylase, C-terminal

ClanCL0098SPOUT

External Links

UniProt: P0AGJ4

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