ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P0DOC6_nD6 - ECOD Domain | ECOD

ECOD/Domains/P0DOC6_nD6

P0DOC6_nD6

UID: 004216419

AlphaFold

Range: 506-610,831-915,1011-1065
AlphaFold: AF-P0DOC6
UniProt: P0DOC6 (all domains)
Gene: cas13a

Protein: CRISPR-associated endoribonuclease Cas13a (EC 3.1.-.-) (CRISPR-associated endoribonuclease C2c2) (EndoRNase) (LshC2c2)

3D Structure

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Related Domains

Browse other domains in Cas13a_endoribonuclease →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupHEPN(601.7)

TT-groupNucleotidyltransferase substrate binding subunit/domain(601.7.1)

FFamilyCas13a_endoribonuclease(601.7.1.39)

Pfam Families

PF28192Cas13a_endoribonuclease

CRISPR-associated endoribonuclease Cas13a

External Links

AlphaFold DB: P0DOC6 UniProt: P0DOC6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 506-610,831-915,1011-1065