ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C5A074_nD1 - ECOD Domain | ECOD

ECOD/Domains/C5A074_nD1

C5A074_nD1

UID: 004216552

AlphaFold

Range: 6-165
AlphaFold: AF-C5A074
UniProt: C5A074 (all domains)
Gene: rhaR

Protein: HTH-type transcriptional activator RhaR (L-rhamnose operon transcriptional activator RhaR)

3D Structure

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Related Domains

Browse other domains in AraC_binding, Cupin_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyAraC_binding, Cupin_2(10.12.1.104)

Pfam Families

PF02311AraC_binding

AraC-like ligand binding domain

ClanCL0029Cupin

PF07883Cupin_2

Cupin domain

ClanCL0029Cupin

External Links

AlphaFold DB: C5A074 UniProt: C5A074

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-165