ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O82881_nD1 - ECOD Domain | ECOD

ECOD/Domains/O82881_nD1

O82881_nD1

UID: 004216985

AlphaFold

Range: 1-85
AlphaFold: AF-O82881
UniProt: O82881 (all domains)
Gene: lsoA

Protein: mRNA endoribonuclease LsoA (EC 3.1.-.-) (Toxin LsoA)

3D Structure

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Related Domains

Browse other domains in RnlA_toxin_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupToxin RnlA N-terminal domains(331.19)

TT-groupToxin RnlA N-terminal domains(331.19.1)

FFamilyRnlA_toxin_N(331.19.1.2)

Pfam Families

PF19417RnlA_toxin_N

RNase LS, bacterial toxin N-terminal

External Links

AlphaFold DB: O82881 UniProt: O82881

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-85