ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A4QJJ1_nD7 - ECOD Domain | ECOD

ECOD/Domains/A4QJJ1_nD7

A4QJJ1_nD7

UID: 004221742

AlphaFold

Range: 956-1070
AlphaFold: AF-A4QJJ1
UniProt: A4QJJ1 (all domains)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-terminal domain in beta subunit of DNA dependent RNA-polymerase(4043)

HH-groupC-terminal domain in beta subunit of DNA dependent RNA-polymerase(4043.1)

TT-groupC-terminal domain in beta subunit of DNA dependent RNA-polymerase(4043.1.1)

FFamilyRNA_pol_Rpb2_6,RNA_pol_Rpb2_7(4043.1.1.1)

Pfam Families

PF00562RNA_pol_Rpb2_6

RNA polymerase Rpb2, domain 6

ClanCL0410LEF-8-like

PF04560RNA_pol_Rpb2_7

RNA polymerase Rpb2, domain 7

External Links

AlphaFold DB: A4QJJ1 UniProt: A4QJJ1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 956-1070