ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B2SQT4_nD2 - ECOD Domain | ECOD

ECOD/Domains/B2SQT4_nD2

B2SQT4_nD2

UID: 004222021

AlphaFold

Range: 6-50,176-240
AlphaFold: AF-B2SQT4
UniProt: B2SQT4 (all domains)
Gene: rpoA

Protein: DNA-directed RNA polymerase subunit alpha (RNAP subunit alpha) (EC 2.7.7.6) (RNA polymerase subunit alpha) (Transcriptase subunit alpha)

3D Structure

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Related Domains

Browse other domains in RNA_pol_L →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDCoH-like(305)

HH-groupRBP11-like subunits of RNA polymerase(305.1)

TT-groupRBP11-like subunits of RNA polymerase(305.1.1)

FFamilyRNA_pol_L(305.1.1.1)

Pfam Families

PF01193RNA_pol_L

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

AlphaFold DB: B2SQT4 UniProt: B2SQT4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-50,176-240