ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ydwB1 - ECOD Domain | ECOD

ECOD/Domains/e2ydwB1

e2ydwB1

UID: 000422455

PDB

Range: B:77-181
PDB: 2YDW chain B(all domains)
UniProt: P25440 (all domains)
Gene: BRD2

Molecule: BROMODOMAIN-CONTAINING PROTEIN 2

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

BENZYL [(4R)-1-METHYL-6-PHENYL-4H-[1,2,4]TRIAZOLO[4,3-A][1,4]BENZODIAZEPIN-4-YL]CARBAMATEWSH

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 2YDW RCSB PDB: 2YDW PDBe: 2YDW UniProt: P25440

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