ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5FME7_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5FME7_nD1

Q5FME7_nD1

UID: 004238440

AlphaFold

Range: 1-90
AlphaFold: AF-Q5FME7
UniProt: Q5FME7 (all domains)
Gene: rpoE

Protein: Probable DNA-directed RNA polymerase subunit delta (RNAP delta factor)

3D Structure

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Related Domains

Browse other domains in HARE-HTH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyHARE-HTH(101.1.2.67)

Pfam Families

PF05066HARE-HTH

HB1, ASXL, restriction endonuclease HTH domain

ClanCL0123HTH

External Links

AlphaFold DB: Q5FME7 UniProt: Q5FME7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-90