ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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D1CDJ5_nD1 - ECOD Domain | ECOD

ECOD/Domains/D1CDJ5_nD1

D1CDJ5_nD1

UID: 004243027

AlphaFold

Range: 36-115,301-310
AlphaFold: AF-D1CDJ5
UniProt: D1CDJ5 (all domains)

3D Structure

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Related Domains

Browse other domains in SecD_1st →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilySecD_1st(304.28.1.4)

Pfam Families

PF21760SecD_1st

Protein translocase subunit SecDF, P1 domain, N-terminal

ClanCL0322RND_permease

External Links

AlphaFold DB: D1CDJ5 UniProt: D1CDJ5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-115,301-310