ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3slpB1 - ECOD Domain | ECOD

ECOD/Domains/e3slpB1

e3slpB1

UID: 000424667

PDB

Range: B:1-226
PDB: 3SLP chain B(all domains)
UniProt: P03697 (all domains)
Gene: exo

Molecule: Exonuclease

3D Structure

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Related Domains

Browse other domains in YqaJ →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyYqaJ(2008.1.1.50)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Pfam Families

YqaJ-like viral recombinase domain

ClanCL0236PDDEXK

External Links

ECOD PDB View: 3SLP RCSB PDB: 3SLP PDBe: 3SLP UniProt: P03697

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.