ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3srxA1 - ECOD Domain | ECOD

ECOD/Domains/e3srxA1

e3srxA1

UID: 000424733

PDB

Range: A:34-270
PDB: 3SRX chain A(all domains)
UniProt: C7C422 (all domains)
Gene: blaNDM-1

Molecule: Beta-lactamase NDM-1

3D Structure

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Related Domains

Browse other domains in Lactamase_B →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B(247.1.1.1)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
Chloride ionCL
Thiocyanate ionSCN

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 3SRX RCSB PDB: 3SRX PDBe: 3SRX UniProt: C7C422

Downloads

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+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.