ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8FFE0_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8FFE0_nD2

Q8FFE0_nD2

UID: 004251473

AlphaFold

Range: 136-190
AlphaFold: AF-Q8FFE0
UniProt: Q8FFE0 (all domains)
Gene: ypdB

Protein: Transcriptional regulatory protein YpdB

3D Structure

Loading viewer...

Related Domains

Browse other domains in LytTR →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupChromo domain-like(4.8)

TT-groupChromo domain-like(4.8.1)

FFamilyLytTR(4.8.1.5)

Pfam Families

LytTr DNA-binding domain

ClanCL0010SH3

External Links

AlphaFold DB: Q8FFE0 UniProt: Q8FFE0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 136-190