ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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B5F8N4_nD2 - ECOD Domain | ECOD

ECOD/Domains/B5F8N4_nD2

B5F8N4_nD2

UID: 004252489

AlphaFold

Range: 186-275
AlphaFold: AF-B5F8N4
UniProt: B5F8N4 (all domains)

3D Structure

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Related Domains

Browse other domains in RTC_insert →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupRNA 3'-terminal phosphate cyclase, RPTC, insert domain(2485.2)

TT-groupRNA 3'-terminal phosphate cyclase, RPTC, insert domain(2485.2.1)

FFamilyRTC_insert(2485.2.1.1)

Pfam Families

PF05189RTC_insert

RNA 3'-terminal phosphate cyclase (RTC), insert domain

External Links

AlphaFold DB: B5F8N4 UniProt: B5F8N4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-275