ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A6VFH1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A6VFH1_nD1

A6VFH1_nD1

UID: 004253475

AlphaFold

Range: 1-160
AlphaFold: AF-A6VFH1
UniProt: A6VFH1 (all domains)
Gene: serS

Protein: Type-2 serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)

3D Structure

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Related Domains

Browse other domains in tRNA_bind_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupThrRS/AlaRS editing domain(309.1.2)

FFamilytRNA_bind_4(309.1.2.2)

Pfam Families

PF18490tRNA_bind_4

tRNA-binding domain

ClanCL0094Peptidase_ME

External Links

AlphaFold DB: A6VFH1 UniProt: A6VFH1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-160