ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B1L8F3_nD3 - ECOD Domain | ECOD

ECOD/Domains/B1L8F3_nD3

B1L8F3_nD3

UID: 004253892

AlphaFold

Range: 371-430
AlphaFold: AF-B1L8F3
UniProt: B1L8F3 (all domains)
Gene: miaB

Protein: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC 2.8.4.3) ((Dimethylallyl)adenosine tRNA methylthiotransferase MiaB) (tRNA-i(6)A37 methylthiotransferase)

3D Structure

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Related Domains

Browse other domains in TRAM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyTRAM(2.1.1.18)

Pfam Families

TRAM domain

ClanCL0021OB

External Links

AlphaFold DB: B1L8F3 UniProt: B1L8F3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 371-430